Nucleotides

Nucleic acids are linear, unbranched polymers of nucleotides.

Nucleotides consist of three parts:

1. A five-carbon sugar (hence a pentose). Two kinds are found:

Deoxyribose-containing nucleotides, the deoxyribonucleotides, are the monomers of DNA.

Ribose-containing nucleotides, the ribonucleotides, are the monomers of RNA.

2. A nitrogen-containing ring structure called a base. The base is attached to the 1' carbon atom of the pentose.

In DNA, four different bases are found:
  1. two purines, called adenine (A) and guanine (G)
  2. two pyrimidines, called thymine (T) and cytosine (C)

RNA contains:

  1. The same purines, adenine (A) and guanine (G).
  2. RNA also uses the pyrimidine cytosine (C), but instead of thymine, it uses the pyrimidine uracil (U).

The Pyrimidines        

    The Purines


The combination of a base and a pentose is called a nucleoside.

3. One (as shown in the first figure), two, or three phosphate groups. These are attached to the 5' carbon atom of the pentose.

Both DNA and RNA are assembled from nucleoside triphosphates.

For DNA, these are dATP, dCTP, dGTP, and dTTP.

For RNA, these are ATP, CTP, GTP, and UTP.

In both cases, as each nucleotide is attached, the second and third phosphates are removed.

The nucleosides and their mono-, di-, and triphosphates
Base Nucleoside Nucleotides
DNAAdenine (A)DeoxyadenosinedAMPdADPdATP
Guanine (G)DeoxyguanosinedGMPdGDPdGTP
Cytosine (C)DeoxycytidinedCMPdCDPdCTP
Thymine (T)DeoxythymidinedTMPdTDPdTTP
RNAAdenine (A)AdenosineAMPADPATP
Guanine (G)GuanosineGMPGDPGTP
Cytosine (C)CytidineCMPCDPCTP
Uracil (U)UridineUMPUDPUTP
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25 February 1996